Detailed information of SNP:



SNP ID: sf0724503132(Gbrowse)

Chromosome: chr07

Position: 24503132
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1419 87.39% 12.61%
All Indica799 99.25% 0.75%
All Japonica497 78.87% 21.13%
Aus67 16.42% 83.58%
Indica I375 100.00% 0.00%
Indica II213 97.65% 2.35%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica335 71.64% 28.36%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 86.76% 13.24%
Group VI/Aromatic14 50.00% 50.00%
Intermediate42 88.10% 11.90%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0724503132 C->T INTERGENIC None