Detailed information of SNP:



SNP ID: sf0724527743(Gbrowse)

Chromosome: chr07

Position: 24527743
Major allele: G

Minor allele: T

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of T(minor allele)
All1416 70.41% 29.59%
All Indica799 96.25% 3.75%
All Japonica495 23.43% 76.57%
Aus67 100.00% 0.00%
Indica I375 99.20% 0.80%
Indica II213 94.84% 5.16%
Indica Intermediate211 92.42% 7.58%
Temperate Japonica334 31.14% 68.86%
Tropical Japonica94 1.06% 98.94%
Japonica Intermediate67 16.42% 83.58%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 75.61% 24.39%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0724527743 T->G INTERGENIC None