Detailed information of SNP:
SNP ID:
sf0724556795(Gbrowse)
Chromosome: chr07 Position: 24556795 |
Major allele:
A
Minor allele: G Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
---|---|---|---|
All | 1407 | 67.59% | 32.41% |
All Indica | 797 | 93.73% | 6.27% |
All Japonica | 492 | 21.54% | 78.46% |
Aus | 63 | 90.48% | 9.52% |
Indica I | 373 | 95.44% | 4.56% |
Indica II | 213 | 94.37% | 5.63% |
Indica Intermediate | 211 | 90.05% | 9.95% |
Temperate Japonica | 331 | 29.00% | 71.00% |
Tropical Japonica | 94 | 1.06% | 98.94% |
Japonica Intermediate | 67 | 13.43% | 86.57% |
Group VI/Aromatic | 14 | 85.71% | 14.29% |
Intermediate | 41 | 70.73% | 29.27% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0724556795 | G->A | INTERGENIC | None |