Detailed information of SNP:



SNP ID: sf0725368057(Gbrowse)

Chromosome: chr07

Position: 25368057
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 92.46% 7.54%
All Indica799 86.86% 13.14%
All Japonica497 100.00% 0.00%
Aus67 97.01% 2.99%
Indica I375 91.47% 8.53%
Indica II213 92.02% 7.98%
Indica Intermediate211 73.46% 26.54%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0725368057 G->A INTERGENIC None