Detailed information of SNP:
|
SNP ID:
sf0726063679(Gbrowse)
Chromosome: chr07 Position: 26063679 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1413 | 69.21% | 30.79% |
| All Indica | 795 | 48.93% | 51.07% |
| All Japonica | 496 | 99.60% | 0.40% |
| Aus | 66 | 68.18% | 31.82% |
| Indica I | 372 | 62.10% | 37.90% |
| Indica II | 213 | 25.35% | 74.65% |
| Indica Intermediate | 210 | 49.52% | 50.48% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 67 | 97.01% | 2.99% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 88.10% | 11.90% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0726063679 | A->G | INTERGENIC | None |