Detailed information of SNP:
|
SNP ID:
sf0726195332(Gbrowse)
Chromosome: chr07 Position: 26195332 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1402 | 94.37% | 5.63% |
| All Indica | 787 | 94.28% | 5.72% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 62 | 48.39% | 51.61% |
| Indica I | 369 | 98.64% | 1.36% |
| Indica II | 211 | 94.31% | 5.69% |
| Indica Intermediate | 207 | 86.47% | 13.53% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0726195332 | G->A | INTERGENIC | None |