Detailed information of SNP:
|
SNP ID:
sf0726218346(Gbrowse)
Chromosome: chr07 Position: 26218346 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1348 | 87.61% | 12.39% |
| All Indica | 799 | 99.62% | 0.38% |
| All Japonica | 427 | 62.30% | 37.70% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 99.73% | 0.27% |
| Indica II | 213 | 99.06% | 0.94% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 282 | 49.65% | 50.35% |
| Tropical Japonica | 83 | 93.98% | 6.02% |
| Japonica Intermediate | 62 | 77.42% | 22.58% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 92.68% | 7.32% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0726218346 | A->G | INTERGENIC | None |