Detailed information of SNP:



SNP ID: sf0726318066(Gbrowse)

Chromosome: chr07

Position: 26318066
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1419 82.38% 17.62%
All Indica799 98.75% 1.25%
All Japonica497 53.12% 46.88%
Aus67 100.00% 0.00%
Indica I375 97.60% 2.40%
Indica II213 100.00% 0.00%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica335 70.45% 29.55%
Tropical Japonica94 10.64% 89.36%
Japonica Intermediate68 26.47% 73.53%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 83.33% 16.67%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0726318066 C->T INTERGENIC None