Detailed information of SNP:
|
SNP ID:
sf0726430706(Gbrowse)
Chromosome: chr07 Position: 26430706 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1368 | 68.79% | 31.21% |
| All Indica | 788 | 97.34% | 2.66% |
| All Japonica | 461 | 14.32% | 85.68% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 365 | 95.07% | 4.93% |
| Indica II | 213 | 99.06% | 0.94% |
| Indica Intermediate | 210 | 99.52% | 0.48% |
| Temperate Japonica | 332 | 2.71% | 97.29% |
| Tropical Japonica | 70 | 65.71% | 34.29% |
| Japonica Intermediate | 59 | 18.64% | 81.36% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 38 | 71.05% | 28.95% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0726430706 | A->G | INTERGENIC | None |