Detailed information of SNP:
|
SNP ID:
sf0726513656(Gbrowse)
Chromosome: chr07 Position: 26513656 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1412 | 84.70% | 15.30% |
| All Indica | 794 | 89.29% | 10.71% |
| All Japonica | 496 | 75.81% | 24.19% |
| Aus | 67 | 94.03% | 5.97% |
| Indica I | 374 | 86.90% | 13.10% |
| Indica II | 212 | 99.06% | 0.94% |
| Indica Intermediate | 208 | 83.65% | 16.35% |
| Temperate Japonica | 335 | 94.33% | 5.67% |
| Tropical Japonica | 93 | 19.35% | 80.65% |
| Japonica Intermediate | 68 | 61.76% | 38.24% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 82.93% | 17.07% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0726513656 | G->A | INTERGENIC | None |