Detailed information of SNP:
|
SNP ID:
sf0726558143(Gbrowse)
Chromosome: chr07 Position: 26558143 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1417 | 90.26% | 9.74% |
| All Indica | 798 | 90.60% | 9.40% |
| All Japonica | 496 | 88.10% | 11.90% |
| Aus | 67 | 95.52% | 4.48% |
| Indica I | 374 | 92.51% | 7.49% |
| Indica II | 213 | 97.18% | 2.82% |
| Indica Intermediate | 211 | 80.57% | 19.43% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 93 | 62.37% | 37.63% |
| Japonica Intermediate | 68 | 66.18% | 33.82% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0726558143 | A->G | INTERGENIC | None |