Detailed information of SNP:
|
SNP ID:
sf0726739561(Gbrowse)
Chromosome: chr07 Position: 26739561 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1312 | 83.46% | 16.54% |
| All Indica | 799 | 98.50% | 1.50% |
| All Japonica | 391 | 49.36% | 50.64% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 98.67% | 1.33% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 96.68% | 3.32% |
| Temperate Japonica | 231 | 23.81% | 76.19% |
| Tropical Japonica | 94 | 93.62% | 6.38% |
| Japonica Intermediate | 66 | 75.76% | 24.24% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 82.93% | 17.07% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0726739561 | A->G | INTERGENIC | None |