Detailed information of SNP:
|
SNP ID:
sf0726747328(Gbrowse)
Chromosome: chr07 Position: 26747328 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1394 | 94.69% | 5.31% |
| All Indica | 783 | 91.44% | 8.56% |
| All Japonica | 495 | 99.60% | 0.40% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 373 | 93.30% | 6.70% |
| Indica II | 209 | 88.52% | 11.48% |
| Indica Intermediate | 201 | 91.04% | 8.96% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 93 | 97.85% | 2.15% |
| Japonica Intermediate | 67 | 100.00% | 0.00% |
| Group VI/Aromatic | 8 | 75.00% | 25.00% |
| Intermediate | 41 | 95.12% | 4.88% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0726747328 | G->A | INTERGENIC | None |