Detailed information of SNP:
|
SNP ID:
sf0726757304(Gbrowse)
Chromosome: chr07 Position: 26757304 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 57.87% | 42.13% |
| All Indica | 797 | 92.60% | 7.40% |
| All Japonica | 497 | 1.01% | 98.99% |
| Aus | 67 | 64.18% | 35.82% |
| Indica I | 375 | 89.87% | 10.13% |
| Indica II | 212 | 98.58% | 1.42% |
| Indica Intermediate | 210 | 91.43% | 8.57% |
| Temperate Japonica | 335 | 0.30% | 99.70% |
| Tropical Japonica | 94 | 3.19% | 96.81% |
| Japonica Intermediate | 68 | 1.47% | 98.53% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 47.62% | 52.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0726757304 | A->G | INTERGENIC | None |