Detailed information of SNP:
SNP ID:
sf0726875453(Gbrowse)
Chromosome: chr07 Position: 26875453 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1419 | 92.46% | 7.54% |
All Indica | 799 | 97.75% | 2.25% |
All Japonica | 497 | 83.70% | 16.30% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 95.20% | 4.80% |
Indica II | 213 | 100.00% | 0.00% |
Indica Intermediate | 211 | 100.00% | 0.00% |
Temperate Japonica | 335 | 95.22% | 4.78% |
Tropical Japonica | 94 | 43.62% | 56.38% |
Japonica Intermediate | 68 | 82.35% | 17.65% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 80.95% | 19.05% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0726875453 | G->A | INTERGENIC | None |