Detailed information of SNP:



SNP ID: sf0727644226(Gbrowse)

Chromosome: chr07

Position: 27644226
Major allele: A

Minor allele: C

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of C(minor allele)
All1336 93.56% 6.44%
All Indica796 99.62% 0.38%
All Japonica422 80.81% 19.19%
Aus67 100.00% 0.00%
Indica I374 100.00% 0.00%
Indica II212 100.00% 0.00%
Indica Intermediate210 98.57% 1.43%
Temperate Japonica320 91.88% 8.13%
Tropical Japonica55 34.55% 65.45%
Japonica Intermediate47 59.57% 40.43%
Group VI/Aromatic14 100.00% 0.00%
Intermediate37 94.59% 5.41%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0727644226 A->C INTERGENIC None