Detailed information of SNP:
|
SNP ID:
sf0729676699(Gbrowse)
Chromosome: chr07 Position: 29676699 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1314 | 98.55% | 1.45% |
| All Indica | 799 | 100.00% | 0.00% |
| All Japonica | 395 | 95.19% | 4.81% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 240 | 92.08% | 7.92% |
| Tropical Japonica | 92 | 100.00% | 0.00% |
| Japonica Intermediate | 63 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 39 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0729676699 | G->A | INTERGENIC | None |