Detailed information of SNP:



SNP ID: sf0800237957(Gbrowse)

Chromosome: chr08

Position: 237957
Major allele: A

Minor allele: C

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of C(minor allele)
All1402 96.58% 3.42%
All Indica799 98.50% 1.50%
All Japonica494 93.72% 6.28%
Aus54 96.30% 3.70%
Indica I375 98.40% 1.60%
Indica II213 99.06% 0.94%
Indica Intermediate211 98.10% 1.90%
Temperate Japonica334 92.51% 7.49%
Tropical Japonica92 98.91% 1.09%
Japonica Intermediate68 92.65% 7.35%
Group VI/Aromatic14 92.86% 7.14%
Intermediate41 95.12% 4.88%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0800237957 A->C INTERGENIC None