Detailed information of SNP:



SNP ID: sf0800306523(Gbrowse)

Chromosome: chr08

Position: 306523
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1418 84.06% 15.94%
All Indica798 75.56% 24.44%
All Japonica497 99.80% 0.20%
Aus67 83.58% 16.42%
Indica I374 68.98% 31.02%
Indica II213 93.90% 6.10%
Indica Intermediate211 68.72% 31.28%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 7.14% 92.86%
Intermediate42 85.71% 14.29%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0800306523 G->A INTERGENIC None