Detailed information of SNP:



SNP ID: sf0801622802(Gbrowse)

Chromosome: chr08

Position: 1622802
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1419 90.63% 9.37%
All Indica799 100.00% 0.00%
All Japonica497 74.25% 25.75%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 97.61% 2.39%
Tropical Japonica94 18.09% 81.91%
Japonica Intermediate68 36.76% 63.24%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 88.10% 11.90%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0801622802 A->G INTERGENIC None