Detailed information of SNP:



SNP ID: sf0802254221(Gbrowse)

Chromosome: chr08

Position: 2254221
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1411 95.04% 4.96%
All Indica799 100.00% 0.00%
All Japonica489 85.89% 14.11%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica327 80.12% 19.88%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 94.12% 5.88%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0802254221 G->A INTERGENIC None