Detailed information of SNP:
SNP ID:
sf0802254221(Gbrowse)
Chromosome: chr08 Position: 2254221 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1411 | 95.04% | 4.96% |
All Indica | 799 | 100.00% | 0.00% |
All Japonica | 489 | 85.89% | 14.11% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 100.00% | 0.00% |
Indica II | 213 | 100.00% | 0.00% |
Indica Intermediate | 211 | 100.00% | 0.00% |
Temperate Japonica | 327 | 80.12% | 19.88% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 94.12% | 5.88% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0802254221 | G->A | INTERGENIC | None |