Detailed information of SNP:
|
SNP ID:
sf0802998706(Gbrowse)
Chromosome: chr08 Position: 2998706 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1392 | 94.40% | 5.60% |
| All Indica | 774 | 89.92% | 10.08% |
| All Japonica | 496 | 100.00% | 0.00% |
| Aus | 66 | 100.00% | 0.00% |
| Indica I | 359 | 84.96% | 15.04% |
| Indica II | 211 | 99.53% | 0.47% |
| Indica Intermediate | 204 | 88.73% | 11.27% |
| Temperate Japonica | 334 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0802998706 | G->A | INTERGENIC | None |