Detailed information of SNP:



SNP ID: sf0803241002(Gbrowse)

Chromosome: chr08

Position: 3241002
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 93.80% 6.20%
All Indica799 100.00% 0.00%
All Japonica497 82.70% 17.30%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 77.01% 22.99%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 86.76% 13.24%
Group VI/Aromatic14 92.86% 7.14%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0803241002 G->A INTERGENIC None