Detailed information of SNP:
SNP ID:
sf0803241002(Gbrowse)
Chromosome: chr08 Position: 3241002 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1419 | 93.80% | 6.20% |
All Indica | 799 | 100.00% | 0.00% |
All Japonica | 497 | 82.70% | 17.30% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 100.00% | 0.00% |
Indica II | 213 | 100.00% | 0.00% |
Indica Intermediate | 211 | 100.00% | 0.00% |
Temperate Japonica | 335 | 77.01% | 22.99% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 86.76% | 13.24% |
Group VI/Aromatic | 14 | 92.86% | 7.14% |
Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0803241002 | G->A | INTERGENIC | None |