Detailed information of SNP:



SNP ID: sf0804451576(Gbrowse)

Chromosome: chr08

Position: 4451576
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1389 96.33% 3.67%
All Indica799 100.00% 0.00%
All Japonica469 89.98% 10.02%
Aus66 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica318 100.00% 0.00%
Tropical Japonica85 48.24% 51.76%
Japonica Intermediate66 95.45% 4.55%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 90.24% 9.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0804451576 G->A INTERGENIC None