Detailed information of SNP:
|
SNP ID:
sf0804859841(Gbrowse)
Chromosome: chr08 Position: 4859841 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1385 | 95.60% | 4.40% |
| All Indica | 794 | 96.47% | 3.53% |
| All Japonica | 495 | 100.00% | 0.00% |
| Aus | 54 | 44.44% | 55.56% |
| Indica I | 374 | 98.93% | 1.07% |
| Indica II | 209 | 94.74% | 5.26% |
| Indica Intermediate | 211 | 93.84% | 6.16% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 92 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 4 | 100.00% | 0.00% |
| Intermediate | 38 | 92.11% | 7.89% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0804859841 | G->A | INTERGENIC | None |