Detailed information of SNP:
SNP ID:
sf0804943078(Gbrowse)
Chromosome: chr08 Position: 4943078 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
---|---|---|---|
All | 1411 | 91.42% | 8.58% |
All Indica | 794 | 93.07% | 6.93% |
All Japonica | 494 | 93.72% | 6.28% |
Aus | 67 | 65.67% | 34.33% |
Indica I | 375 | 99.20% | 0.80% |
Indica II | 209 | 77.51% | 22.49% |
Indica Intermediate | 210 | 97.62% | 2.38% |
Temperate Japonica | 335 | 98.51% | 1.49% |
Tropical Japonica | 94 | 74.47% | 25.53% |
Japonica Intermediate | 65 | 96.92% | 3.08% |
Group VI/Aromatic | 14 | 57.14% | 42.86% |
Intermediate | 42 | 85.71% | 14.29% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0804943078 | A->G | INTERGENIC | None |