Detailed information of SNP:



SNP ID: sf0805103619(Gbrowse)

Chromosome: chr08

Position: 5103619
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1418 96.76% 3.24%
All Indica798 94.36% 5.64%
All Japonica497 100.00% 0.00%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 79.81% 20.19%
Indica Intermediate210 99.05% 0.95%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0805103619 G->A INTERGENIC None