Detailed information of SNP:



SNP ID: sf0805427637(Gbrowse)

Chromosome: chr08

Position: 5427637
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1412 93.06% 6.94%
All Indica799 99.87% 0.13%
All Japonica490 80.41% 19.59%
Aus67 100.00% 0.00%
Indica I375 99.73% 0.27%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica334 98.50% 1.50%
Tropical Japonica89 13.48% 86.52%
Japonica Intermediate67 79.10% 20.90%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0805427637 G->A INTERGENIC None