Detailed information of SNP:
|
SNP ID:
sf0806318099(Gbrowse)
Chromosome: chr08 Position: 6318099 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1395 | 97.28% | 2.72% |
| All Indica | 783 | 95.40% | 4.60% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 61 | 98.36% | 1.64% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 197 | 83.25% | 16.75% |
| Indica Intermediate | 211 | 98.58% | 1.42% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 97.50% | 2.50% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0806318099 | G->A | INTERGENIC | None |