Detailed information of SNP:



SNP ID: sf0806409052(Gbrowse)

Chromosome: chr08

Position: 6409052
Major allele: G

Minor allele: T

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of T(minor allele)
All1412 92.21% 7.79%
All Indica793 86.38% 13.62%
All Japonica497 99.60% 0.40%
Aus67 100.00% 0.00%
Indica I371 81.67% 18.33%
Indica II213 94.37% 5.63%
Indica Intermediate209 86.60% 13.40%
Temperate Japonica335 99.40% 0.60%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0806409052 G->T INTERGENIC None