Detailed information of SNP:
|
SNP ID:
sf0807751754(Gbrowse)
Chromosome: chr08 Position: 7751754 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1411 | 54.57% | 45.43% |
| All Indica | 792 | 78.03% | 21.97% |
| All Japonica | 497 | 10.87% | 89.13% |
| Aus | 67 | 89.55% | 10.45% |
| Indica I | 372 | 93.82% | 6.18% |
| Indica II | 210 | 50.95% | 49.05% |
| Indica Intermediate | 210 | 77.14% | 22.86% |
| Temperate Japonica | 335 | 11.94% | 88.06% |
| Tropical Japonica | 94 | 5.32% | 94.68% |
| Japonica Intermediate | 68 | 13.24% | 86.76% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 58.54% | 41.46% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0807751754 | A->G | INTERGENIC | None |