Detailed information of SNP:



SNP ID: sf0807757912(Gbrowse)

Chromosome: chr08

Position: 7757912
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1419 89.22% 10.78%
All Indica799 99.62% 0.38%
All Japonica497 70.02% 29.98%
Aus67 100.00% 0.00%
Indica I375 99.47% 0.53%
Indica II213 100.00% 0.00%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica335 64.78% 35.22%
Tropical Japonica94 87.23% 12.77%
Japonica Intermediate68 72.06% 27.94%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0807757912 C->T INTERGENIC None