Detailed information of SNP:



SNP ID: sf0808238794(Gbrowse)

Chromosome: chr08

Position: 8238794
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1419 95.35% 4.65%
All Indica799 99.87% 0.13%
All Japonica497 95.98% 4.02%
Aus67 40.30% 59.70%
Indica I375 99.73% 0.27%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 99.10% 0.90%
Tropical Japonica94 85.11% 14.89%
Japonica Intermediate68 95.59% 4.41%
Group VI/Aromatic14 78.57% 21.43%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0808238794 C->T INTERGENIC None