Detailed information of SNP:
|
SNP ID:
sf0808426101(Gbrowse)
Chromosome: chr08 Position: 8426101 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1409 | 97.02% | 2.98% |
| All Indica | 790 | 96.84% | 3.16% |
| All Japonica | 497 | 97.59% | 2.41% |
| Aus | 67 | 97.01% | 2.99% |
| Indica I | 371 | 97.57% | 2.43% |
| Indica II | 211 | 95.26% | 4.74% |
| Indica Intermediate | 208 | 97.12% | 2.88% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 92.55% | 7.45% |
| Japonica Intermediate | 68 | 94.12% | 5.88% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 41 | 95.12% | 4.88% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0808426101 | G->A | INTERGENIC | None |