Detailed information of SNP:
SNP ID:
sf0808584114(Gbrowse)
Chromosome: chr08 Position: 8584114 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1234 | 79.01% | 20.99% |
All Indica | 718 | 73.40% | 26.60% |
All Japonica | 394 | 84.77% | 15.23% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 344 | 74.13% | 25.87% |
Indica II | 191 | 77.49% | 22.51% |
Indica Intermediate | 183 | 67.76% | 32.24% |
Temperate Japonica | 256 | 78.91% | 21.09% |
Tropical Japonica | 75 | 94.67% | 5.33% |
Japonica Intermediate | 63 | 96.83% | 3.17% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 41 | 80.49% | 19.51% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0808584114 | G->A | INTERGENIC | None |