Detailed information of SNP:
|
SNP ID:
sf0808714276(Gbrowse)
Chromosome: chr08 Position: 8714276 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1415 | 78.52% | 21.48% |
| All Indica | 796 | 68.22% | 31.78% |
| All Japonica | 497 | 99.40% | 0.60% |
| Aus | 66 | 59.09% | 40.91% |
| Indica I | 373 | 64.88% | 35.12% |
| Indica II | 213 | 81.69% | 18.31% |
| Indica Intermediate | 210 | 60.48% | 39.52% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 0.00% | 100.00% |
| Intermediate | 42 | 83.33% | 16.67% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0808714276 | G->A | INTERGENIC | None |