Detailed information of SNP:
|
SNP ID:
sf0809382296(Gbrowse)
Chromosome: chr08 Position: 9382296 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 71.86% | 28.14% |
| All Indica | 798 | 62.66% | 37.34% |
| All Japonica | 497 | 95.57% | 4.43% |
| Aus | 67 | 1.49% | 98.51% |
| Indica I | 375 | 69.33% | 30.67% |
| Indica II | 213 | 44.60% | 55.40% |
| Indica Intermediate | 210 | 69.05% | 30.95% |
| Temperate Japonica | 335 | 98.21% | 1.79% |
| Tropical Japonica | 94 | 88.30% | 11.70% |
| Japonica Intermediate | 68 | 92.65% | 7.35% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 71.43% | 28.57% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0809382296 | G->A | INTERGENIC | None |