Detailed information of SNP:



SNP ID: sf0809844350(Gbrowse)

Chromosome: chr08

Position: 9844350
Major allele: C

Minor allele: A

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of A(minor allele)
All1411 93.98% 6.02%
All Indica799 100.00% 0.00%
All Japonica489 83.64% 16.36%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 98.51% 1.49%
Tropical Japonica87 43.68% 56.32%
Japonica Intermediate67 61.19% 38.81%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 88.10% 11.90%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0809844350 C->A INTERGENIC None