Detailed information of SNP:
|
SNP ID:
sf0810073471(Gbrowse)
Chromosome: chr08 Position: 10073471 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1383 | 76.14% | 23.86% |
| All Indica | 797 | 71.39% | 28.61% |
| All Japonica | 466 | 89.06% | 10.94% |
| Aus | 67 | 44.78% | 55.22% |
| Indica I | 374 | 63.90% | 36.10% |
| Indica II | 213 | 85.45% | 14.55% |
| Indica Intermediate | 210 | 70.48% | 29.52% |
| Temperate Japonica | 330 | 99.70% | 0.30% |
| Tropical Japonica | 77 | 54.55% | 45.45% |
| Japonica Intermediate | 59 | 74.58% | 25.42% |
| Group VI/Aromatic | 13 | 15.38% | 84.62% |
| Intermediate | 40 | 92.50% | 7.50% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0810073471 | G->A | INTERGENIC | None |