Detailed information of SNP:
|
SNP ID:
sf0810584968(Gbrowse)
Chromosome: chr08 Position: 10584968 |
Major allele:
G
Minor allele: T Reference allele: T |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of T(minor allele) |
|---|---|---|---|
| All | 1312 | 93.37% | 6.63% |
| All Indica | 799 | 100.00% | 0.00% |
| All Japonica | 393 | 77.86% | 22.14% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 240 | 65.00% | 35.00% |
| Tropical Japonica | 93 | 100.00% | 0.00% |
| Japonica Intermediate | 60 | 95.00% | 5.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 39 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0810584968 | T->G | INTERGENIC | None |