Detailed information of SNP:
|
SNP ID:
sf0810667703(Gbrowse)
Chromosome: chr08 Position: 10667703 |
Major allele:
C
Minor allele: G Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of C(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1393 | 90.67% | 9.33% |
| All Indica | 792 | 96.72% | 3.28% |
| All Japonica | 497 | 88.13% | 11.87% |
| Aus | 51 | 23.53% | 76.47% |
| Indica I | 375 | 99.73% | 0.27% |
| Indica II | 206 | 89.81% | 10.19% |
| Indica Intermediate | 211 | 98.10% | 1.90% |
| Temperate Japonica | 335 | 88.06% | 11.94% |
| Tropical Japonica | 94 | 85.11% | 14.89% |
| Japonica Intermediate | 68 | 92.65% | 7.35% |
| Group VI/Aromatic | 14 | 85.71% | 14.29% |
| Intermediate | 39 | 89.74% | 10.26% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0810667703 | C->G | INTERGENIC | None |