Detailed information of SNP:
|
SNP ID:
sf0810914119(Gbrowse)
Chromosome: chr08 Position: 10914119 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1275 | 95.06% | 4.94% |
| All Indica | 660 | 90.91% | 9.09% |
| All Japonica | 494 | 100.00% | 0.00% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 313 | 90.10% | 9.90% |
| Indica II | 171 | 91.23% | 8.77% |
| Indica Intermediate | 176 | 92.05% | 7.95% |
| Temperate Japonica | 334 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 66 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 95.00% | 5.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0810914119 | G->A | INTERGENIC | None |