Detailed information of SNP:
|
SNP ID:
sf0812068185(Gbrowse)
Chromosome: chr08 Position: 12068185 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1415 | 96.33% | 3.67% |
| All Indica | 796 | 96.11% | 3.89% |
| All Japonica | 496 | 95.97% | 4.03% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 374 | 97.86% | 2.14% |
| Indica II | 212 | 95.75% | 4.25% |
| Indica Intermediate | 210 | 93.33% | 6.67% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 93 | 82.80% | 17.20% |
| Japonica Intermediate | 68 | 97.06% | 2.94% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0812068185 | G->A | INTERGENIC | None |