Detailed information of SNP:



SNP ID: sf0812103138(Gbrowse)

Chromosome: chr08

Position: 12103138
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1414 93.21% 6.79%
All Indica799 99.62% 0.38%
All Japonica492 83.94% 16.06%
Aus67 98.51% 1.49%
Indica I375 99.47% 0.53%
Indica II213 100.00% 0.00%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica334 99.10% 0.90%
Tropical Japonica92 43.48% 56.52%
Japonica Intermediate66 63.64% 36.36%
Group VI/Aromatic14 50.00% 50.00%
Intermediate42 85.71% 14.29%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0812103138 C->T INTERGENIC None