Detailed information of SNP:



SNP ID: sf0812968483(Gbrowse)

Chromosome: chr08

Position: 12968483
Major allele: C

Minor allele: A

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of A(minor allele)
All1256 92.44% 7.56%
All Indica665 98.20% 1.80%
All Japonica474 82.91% 17.09%
Aus66 100.00% 0.00%
Indica I308 97.40% 2.60%
Indica II180 99.44% 0.56%
Indica Intermediate177 98.31% 1.69%
Temperate Japonica314 76.11% 23.89%
Tropical Japonica92 98.91% 1.09%
Japonica Intermediate68 92.65% 7.35%
Group VI/Aromatic14 100.00% 0.00%
Intermediate37 94.59% 5.41%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0812968483 A->C INTERGENIC None