Detailed information of SNP:
|
SNP ID:
sf0813023823(Gbrowse)
Chromosome: chr08 Position: 13023823 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1353 | 97.19% | 2.81% |
| All Indica | 738 | 94.85% | 5.15% |
| All Japonica | 495 | 100.00% | 0.00% |
| Aus | 66 | 100.00% | 0.00% |
| Indica I | 346 | 93.64% | 6.36% |
| Indica II | 194 | 98.45% | 1.55% |
| Indica Intermediate | 198 | 93.43% | 6.57% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 66 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0813023823 | G->A | INTERGENIC | None |