Detailed information of SNP:



SNP ID: sf0814028837(Gbrowse)

Chromosome: chr08

Position: 14028837
Major allele: A

Minor allele: G

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1403 55.88% 44.12%
All Indica793 93.57% 6.43%
All Japonica487 4.11% 95.89%
Aus67 5.97% 94.03%
Indica I373 96.78% 3.22%
Indica II213 84.51% 15.49%
Indica Intermediate207 97.10% 2.90%
Temperate Japonica327 4.59% 95.41%
Tropical Japonica94 2.13% 97.87%
Japonica Intermediate66 4.55% 95.45%
Group VI/Aromatic14 0.00% 100.00%
Intermediate42 42.86% 57.14%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0814028837 G->A LOC_Os08g23240(LOC_Os08g23240.1) Synonymous