Detailed information of SNP:
|
SNP ID:
sf0814481714(Gbrowse)
Chromosome: chr08 Position: 14481714 |
Major allele:
C
Minor allele: G Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of C(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1413 | 56.05% | 43.95% |
| All Indica | 795 | 84.78% | 15.22% |
| All Japonica | 495 | 5.86% | 94.14% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 373 | 87.40% | 12.60% |
| Indica II | 212 | 81.60% | 18.40% |
| Indica Intermediate | 210 | 83.33% | 16.67% |
| Temperate Japonica | 335 | 3.58% | 96.42% |
| Tropical Japonica | 92 | 9.78% | 90.22% |
| Japonica Intermediate | 68 | 11.76% | 88.24% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 42 | 52.38% | 47.62% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0814481714 | G->C | INTERGENIC | None |