Detailed information of SNP:



SNP ID: sf0815702176(Gbrowse)

Chromosome: chr08

Position: 15702176 		Major allele: G

Minor allele: A

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1394 74.03% 25.97%
All Indica797 99.62% 0.38%
All Japonica487 28.75% 71.25%
Aus54 92.59% 7.41%
Indica I375 100.00% 0.00%
Indica II213 99.06% 0.94%
Indica Intermediate209 99.52% 0.48%
Temperate Japonica325 4.00% 96.00%
Tropical Japonica94 93.62% 6.38%
Japonica Intermediate68 57.35% 42.65%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 80.95% 19.05%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0815702176 A->G INTERGENIC None