Detailed information of SNP:



SNP ID: sf0815978341(Gbrowse)

Chromosome: chr08

Position: 15978341
Major allele: T

Minor allele: G

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of T(major allele)Frequency of G(minor allele)
All1397 65.64% 34.36%
All Indica788 91.75% 8.25%
All Japonica489 19.02% 80.98%
Aus66 90.91% 9.09%
Indica I370 91.89% 8.11%
Indica II210 91.90% 8.10%
Indica Intermediate208 91.35% 8.65%
Temperate Japonica334 1.80% 98.20%
Tropical Japonica90 76.67% 23.33%
Japonica Intermediate65 27.69% 72.31%
Group VI/Aromatic14 100.00% 0.00%
Intermediate40 67.50% 32.50%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0815978341 G->T INTERGENIC None